Author

Sara Ashrafi Kakhki

Harvard University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1 Approach:genetic perturbation / CRISPR· 1 Organism:mouse· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Amy J. WagersiD· 1 shared Amy Lam· 1 shared August D. BrattiiD· 1 shared Bryan L. PeackeriD· 1 shared Christopher L. RiosiD· 1 shared Dev PaudeliD· 1 shared Heidi KletzieniD· 1 shared Hyaeyeong Kim· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCell Biology

Amy J. WagersORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Cell BiologybioRxivPreprintJul 1, 2026

In vivo gene disruption and homology-directed repair in muscles and muscle stem cells using CRISPR/Cas9

Bryan L. Peacker, Kuan‐Hung Lin, Amy Lam…·Amy J. Wagers

This study demonstrates CRISPR-HDR efficiency in postnatal cardiac, skeletal muscle, and muscle stem cells, showing developmental stage-dependent HDR rates and successful correction of a Dmd mutation in mdx mice.

DOI 10.64898/2026.06.30.735705

mousegenetic perturbation / CRISPR

𝕏 PostBluesky

BioengineeringbioRxivPreprintSep 28, 2025

T-PGI: an engineered STITCHR system for scarless, programmable genome integration

Kaveh Daneshvar, Yun Ni, Dev Paudel…·Joo‐Hyung Lee

The paper introduces T-PGI, a system for scarless, programmable genome integration, showing high-fidelity insertion with minimal structural variants.

DOI 10.1101/2025.09.28.679074

DNA methylationwhole-genome sequencing

𝕏 PostBluesky