Author

Sarah A. Vitak

Oregon Health & Science University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:non-human primate· 1 Assay:scATAC-seq· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Frank J. Steemers· 2 shared Andrew AdeyiD· 1 shared Andrew Adey· 1 shared Andrew J. Fields· 1 shared Cole TrapnelliD· 1 shared Gail MandeliD· 1 shared Hannah A. PlineriD· 1 shared Jimi L. Rosenkrantz· 1 shared

Activity by Year

2016-2018 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersNeuroscience

Frank J. Steemers

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2 papers

Recent·Most cited

The accessible chromatin landscape of the hippocampus at single-cell resolution

John R. Sinnamon, Kristof A. Torkenczy, Michael W. Linhoff, Sarah A. Vitak, Ryan M. Mulqueen, Hannah A. Pliner, Cole Trapnell, Frank J. Steemers, Gail Mandel, Andrew Adey

The paper presents a single-cell chromatin accessibility map of the mouse hippocampus using sci-ATAC-seq, identifies cell-type-specific regulatory networks, and provides a resource for future studies.

bioRxiv · Sep 4, 2018Neuroscience

Construction of thousands of single cell genome sequencing libraries using combinatorial indexing

Sarah A. Vitak, Kristof A. Torkenczy, Jimi L. Rosenkrantz, Andrew J. Fields, Lena Christiansen, Melissa H. Wong, Lucia Carbone, Frank J. Steemers, Andrew Adey

The paper introduces SCI-seq, a method to generate thousands of low-cost single-cell libraries for somatic copy number variant detection across various tissues.

bioRxiv · Jul 23, 2016 · PreprintGenomics