Author

Stephan Wolf

German Cancer Research Center

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:benchmark study· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Agata WilkiD· 1 shared Alexander Pintzas· 1 shared Angelika MerkeliD· 1 shared Antonella SarnataroiD· 1 shared Antonia Dimitrakopoulou‐Strauss· 1 shared Chris Lawerenz· 1 shared Christoph BockiD· 1 shared Christoph PlassiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Agata WilkORCID

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2 papers

Recent·Most cited

Pipeline Olympics: continuable benchmarking of computational workflows for DNA methylation sequencing data against an experimental gold-standard

Yu‐Yu Lin, Kersten Breuer, Dieter Weichenhan, Pascal Lafrenz, Antonella Sarnataro, Agata Wilk, Maryna Chepeleva, Oliver Mücke, Maximilian Schönung, Franziska Petermann, Philip Reiner Kensche, Lena Weiser, Frank Thommen, Gideon Giacomelli, Karl J. V. Nordström, , Pavlo Lutsik

The paper benchmarks DNA methylation sequencing workflows against an experimental gold-standard, identifying superior workflows and developing a sustainable benchmarking platform.

Nucleic Acids Research · Sep 12, 2025Peer-reviewedBioinformatics

Molecular and functional profiling unravels targetable vulnerabilities in colorectal cancer

Efstathios‐Iason Vlachavas, Konstantinos Voutetakis, Vivian Kosmidou, Spyridon Tsikalakis, Spyridon Roditis, Konstantinos Pateas, Ryangguk Kim, Kymberleigh Pagel, Stephan Wolf, Gregor Warsow, Antonia Dimitrakopoulou‐Strauss, Georgios N. Zografos, Alexander Pintzas, Johannes Betge, Olga Papadodima, Stefan Wiemann

This study identifies molecular vulnerabilities in colorectal cancer by analyzing MSI and MSS tumors, revealing distinct signaling pathways and potential therapeutic targets.

bioRxiv · Apr 17, 2024Cancer Biology