Author

Sue A. Hammar

Michigan State University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Organism:chicken / avian· 2 Research Focus:genome assembly· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:graph neural network· 1 Approach:statistical model· 1

Frequent Co-Authors

Honghe SuniD· 2 shared Jiantao ZhaoiD· 2 shared Rebecca GrumetiD· 2 shared Shan WuiD· 2 shared Xuebo ZhaoiD· 2 shared Yong XuiD· 2 shared Zhangjun FeiiD· 2 shared Amnon LeviiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersPlant Biology

Honghe SunORCID

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2 papers

Recent·Most cited

Population-level super-pangenome reveals genome evolution and empowers precision breeding in watermelon

Honghe Sun, Jie Zhang, Shengjin Liao, Shaogui Guo, Zhe Zhou, Xuebo Zhao, Shan Wu, Jiantao Zhao, Gong GuoYi, Jinfang Wang, Maoying Li, Yongtao Yu, Yi Ren, Shouwei Tian, Shaofang Li, , Yong Xu

This study constructs a watermelon super-pangenome from 138 genomes, identifies over a million structural variants, and develops genomic prediction models for 18 traits to advance precision breeding.

Nature Genetics · May 1, 2026Peer-reviewedPlant Biology

Graph pangenome reveals structural variation dynamics during cucumber breeding

Xuebo Zhao, Jingyin Yu, Jie Zhang, Honghe Sun, Shan Wu, Jiantao Zhao, Yao Zhou, Sue A. Hammar, Ying-Chen Lin, Zhonghua Zhang, Sanwen Huang, Ronald Dymerski, Feifan Chen, Yiqun Weng, Rebecca Grumet, , Zhangjun Fei

The paper constructs a cucumber pangenome to analyze structural variant dynamics during domestication and breeding, finding SVs are purged more than SNPs and improving genomic prediction accuracy.

Nature Genetics · Feb 10, 2026Peer-reviewedPlant Biology