Author

T. Kassis

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 4 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 2 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Organism:human· 1 Assay:imaging· 1 Assay:organoid / primary culture· 1

Frequent Co-Authors

L. G. Griffith· 4 shared D. L. Trumper· 2 shared L. R. Soenksen· 2 shared V. Hernandez-Gordillo· 2 shared A. Lampejo· 1 shared C. J. W. Yang· 1 shared D. Breault· 1 shared G. Choi· 1 shared

Activity by Year

2016-2019 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersBioengineering

L. G. Griffith

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Niche-inspired synthetic matrices for epithelial organoid culture

V. Hernandez-Gordillo, T. Kassis, A. Lampejo, G. Choi, M. E. Gamboa, J. S. Gnecco, D. Breault, R. Carrier, L. G. Griffith

This study develops synthetic matrices that support human organoid growth by mimicking the niche environment, showing that local biophysical cues, not bulk properties, drive organoid formation.

bioRxiv · Oct 16, 2019Bioengineering

OrgaQuant: Intestinal Organoid Localization and Quantification Using Deep Convolutional Neural Networks

T. Kassis, V. Hernandez-Gordillo, R. Langer, L. G. Griffith

OrgaQuant is a deep learning tool that automatically locates and quantifies intestinal organoids in brightfield images using a dataset of manually annotated images.

bioRxiv · Oct 8, 2018Bioengineering

PiFlow: A Biocompatible Low-Cost Programmable Dynamic Flow Pumping System Utilizing a Raspberry Pi Zero and Commercial Piezoelectric Pumps

T. Kassis, P. M. Perez, C. J. W. Yang, L. R. Soenksen, D. L. Trumper, L. G. Griffith

The paper introduces a low-cost, programmable flow pumping system using a Raspberry Pi Zero and piezoelectric pumps to mimic physiological fluid dynamics in cell culture systems.

bioRxiv · Apr 25, 2018Bioengineering

Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing

L. R. Soenksen, T. Kassis, M. Noh, L. G. Griffith, D. L. Trumper

This paper develops a capacitive sensor and control system for precise, non-contact fluid height monitoring in microfluidic reservoirs, enabling closed-loop feedback control with submillimeter resolution.

bioRxiv · Jan 12, 2018Bioengineering

How do Research Faculty in the Biosciences Evaluate Paper Authorship Criteria?

T. Kassis

This study surveys bioscience faculty on their evaluation of authorship criteria, finding consensus on some factors but disagreement on others like funding procurement.

bioRxiv · Aug 14, 2016Scientific Communication & Education