Author

T. Nobori

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 6

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Organism:Arabidopsis· 6 Research Focus:cell type annotation· 4 Approach:statistical model· 4 Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Assay:scRNA-seq· 3 Assay:spatial transcriptomics· 3 Research Focus:gene regulatory network inference· 2

Frequent Co-Authors

J. R. Ecker· 4 shared J. R. Nery· 3 shared B. Jow· 2 shared K. Tsuda· 2 shared N. Illouz-Eliaz· 2 shared T. A. Lee· 2 shared Y. Tsuda· 2 shared A. Monell· 1 shared

Activity by Year

2019-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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4 shared papersPlant Biology

J. R. Ecker

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6 papers

Recent·Most cited

Time-resolved single-cell and spatial gene regulatory atlas of plants under pathogen attack

T. Nobori, A. Monell, T. A. Lee, J. Zhou, J. R. Nery, J. R. Ecker

The paper presents a time-resolved single-cell and spatial gene regulatory atlas of Arabidopsis thaliana infected by bacterial pathogens, revealing immune responses and gene regulatory logic.

bioRxiv · Apr 10, 2023 · PreprintPlant Biology

A Single-Nucleus Atlas of Seed-to-Seed Development in Arabidopsis

T. A. Lee, T. Nobori, N. Illouz-Eliaz, J. Xu, B. Jow, J. R. Nery, J. R. Ecker

The paper creates a single-nucleus transcriptome atlas of Arabidopsis seed-to-seed development using over 800,000 nuclei across ten stages, revealing transcriptional conservation and heterogeneity in cell types.

bioRxiv · Mar 23, 2023 · PreprintPlant Biology

Stress Recovery Triggers Rapid Transcriptional Reprogramming and Activation of Immunity in Plants

N. Illouz-Eliaz, J. Yu, J. Swift, K. Lande, B. Jow, Z. K. Tuang, T. Lee, A. Yaaran, R. G. Castanon, J. R. Nery, T. Nobori, Y. Zait, S. Burdman, J. R. Ecker

This study shows that drought recovery in plants rapidly activates immune responses, enhancing pathogen resistance across multiple tomato species.

bioRxiv · Feb 27, 2023Plant Biology

PHYTOMap: Multiplexed single-cell 3D spatial gene expression analysis in plant tissue

T. Nobori, M. Oliva, R. Lister, J. R. Ecker

PHYTOMap enables low-cost, transgene-free single-cell spatial gene expression analysis in plant tissue, demonstrating its ability to identify cell types in Arabidopsis roots.

bioRxiv · Jul 28, 2022 · PreprintPlant Biology

Dissecting the co-transcriptome landscape of plants and microbiota members

T. Nobori, Y. Cao, F. Entila, E. Dahms, Y. Tsuda, R. Garrido-Oter, K. Tsuda

This study profiles co-transcriptomes of Arabidopsis and its associated bacteria to understand molecular interactions and bacterial adaptation mechanisms.

bioRxiv · Apr 25, 2021Plant Biology

In planta bacterial multi-omics analysis illuminates regulatory principles underlying plant-pathogen interactions

T. Nobori, Y. Wang, J. Wu, S. C. Stolze, Y. Tsuda, I. Finkemeier, H. Nakagami, K. Tsuda

The paper integrates transcriptome and proteome data from Pseudomonas syringae in Arabidopsis to reveal gene regulation patterns influenced by plant immunity.

bioRxiv · Oct 30, 2019Plant Biology