T. Reiter

Nuclear mRNA metabolism drives selective basket assembly on a subset of nuclear pores in budding yeast

The paper shows that nuclear baskets in budding yeast assemble on a subset of NPCs and depend on RNA processing and mRNP formation.

Eukaryotic genomes from a global metagenomic dataset illuminate trophic modes and biogeography of ocean plankton

The paper introduces EukHeist, a pipeline for retrieving eukaryotic and prokaryotic MAGs from metagenomic data, and applies it to Tara Oceans data to identify ecological cohorts and host-microbe associations.

Mapping global shifts in Saccharomyces cerevisiae gene expression across asynchronous time trajectories with diffusion maps

The paper develops a method to analyze asynchronous gene expression time series in yeast fermentations, identifying vineyard-specific gene expression deviations linked to fermentation outcomes.

Saccharomyces cerevisiae gene expression during fermentation of Pinot noir wines at industrially relevant scale

This study analyzes Saccharomyces cerevisiae gene expression during Pinot noir wine fermentation at pilot scale, identifying both common and novel expression patterns related to industrial conditions.

Transcriptomics provides a genetic signature of vineyard site with insight into vintage-independent regional wine characteristics

The paper identifies genetic signatures of vineyard sites in wine fermentation, showing that microbial DNA presence does not correlate with gene expression but that gene expression patterns can distinguish regional wine characteristics.