Author

Thomas B. Bailey

University of Oregon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:ChIP-seq· 2 Organism:yeast· 2 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Jeffrey N. McKnightiD· 3 shared Laura E. McKnightiD· 3 shared Drake A. DonovaniD· 2 shared Eric U. SelkeriD· 2 shared Johnathan G. CrandalliD· 2 shared Orion GB BanksiD· 2 shared Vi N. TruongiD· 2 shared Abigail L VaaleriD· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersMolecular Biology

Jeffrey N. McKnightORCID

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Author profile →

3 papers

Recent·Most cited

Tup1 is Critical for Transcriptional Repression in Quiescence in S. cerevisiae

Thomas B. Bailey, Phaedra A. Whitty, Eric U. Selker, Jeffrey N. McKnight, Laura E. McKnight

This study shows that Tup1 is essential for transcriptional repression in quiescent S. cerevisiae cells during glucose starvation.

PLoS Genetics · Dec 21, 2022Peer-reviewedMolecular Biology

Rapid and Inexpensive Preparation of Genome-Wide Nucleosome Footprints from Model and Non-Model Organisms

Laura E. McKnight, Johnathan G. Crandall, Thomas B. Bailey, Orion GB Banks, Kona N. Orlandi, Vi N. Truong, Drake A. Donovan, Grace L. Waddell, Elizabeth T. Wiles, Scott D. Hansen, Eric U. Selker, Jeffrey N. McKnight

The paper introduces a rapid, inexpensive protocol for mapping nucleosome positions in fungi and mammalian cells, validated across multiple species and compatible with high-throughput sequencing.

STAR Protocols · May 18, 2021Peer-reviewedGenetics

Basis of Specificity for a Conserved and Promiscuous Chromatin Remodeling Protein

Drake A. Donovan, Johnathan G. Crandall, Vi N. Truong, Abigail L Vaaler, Thomas B. Bailey, Devin Dinwiddie, Orion GB Banks, Laura E. McKnight, Jeffrey N. McKnight

The paper shows Isw2 is a targeted nucleosome remodeler through interactions with sequence-specific factors, using conserved acidic residues in Itc1 to position nucleosomes precisely.

eLife · Feb 12, 2021Peer-reviewedMolecular Biology