Author

Timothy K. McDaniel

Translational Genomics Research Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Jeffrey M. TrentiD· 2 shared Alan Haruo BryceiD· 1 shared Aleksandar SekulićiD· 1 shared Andreas SchereriD· 1 shared Baitang NingiD· 1 shared Bao Quoc TraniD· 1 shared Barbara A. PockajiD· 1 shared Ben Ernest· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Jeffrey M. TrentORCID

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2 papers

Recent·Most cited

Analysis of fragment ends in plasma DNA from patients with cancer

Karan Kumar Budhraja, Bradon R. McDonald, Michelle D. Stephens, Tania Contente‐Cuomo, Havell Markus, Maria Farooq, Patricia Filippsen Favaro, Sydney C Connor, Sara Ann Byron, Jan B. Egan, Brenda J. Ernst, Timothy K. McDaniel, Aleksandar Sekulić, Nhan L. Tran, Michael D. Prados, , Muhammed Murtaza

Analyzing the positioning and nucleotide sequence at fragment ends in plasma DNA may enable cancer diagnostics.

Science Translational Medicine · Jan 11, 2023Peer-reviewedGenetic & Genomic Medicine

Establishing reference samples for detection of somatic mutations and germline variants with NGS technologies

Li Tai Fang, Bin Zhu, Yongmei Zhao, Wanqiu Chen, Zhaowei Yang, Liz Kerrigan, Kurt J. Langenbach, Maryellen de Mars, Charles Lu, Kenneth B. Idler, Howard J. Jacob, Yuanting Zheng, Luyao Ren, Ying Yu, Erich B. Jaeger, , Paul G. Giresi

The paper establishes reference samples with high-coverage whole-genome sequencing to create truth sets for somatic mutation and germline variant detection using NGS technologies.

Nature Biotechnology · Sep 1, 2021Peer-reviewedBioinformatics