Author

Tulasi Nagabandi

Centre for Cellular and Molecular Biology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetic & Genomic Medicine· 2 Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Research Focus:variant calling· 2 Organism:bacteria (other)· 1

Frequent Co-Authors

Divya Tej SowpatiiD· 4 shared Karthik Bharadwaj TallapakaiD· 4 shared Lamuk ZaveriiD· 2 shared Nidhan K. BiswasiD· 2 shared Nitesh Kumar SinghiD· 2 shared Pratheusa Machha· 2 shared Abdul JaleeliD· 1 shared Analabha BasuiD· 1 shared

Activity by Year

2021-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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4 shared papersGenetic & Genomic Medicine

Divya Tej SowpatiORCID

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Author profile →

4 papers

Recent·Most cited

Comprehensive benchmarking of tools for nanopore-based detection of DNA methylation

Onkar Kulkarni, Reuben Jacob Mathew, Rhea Jana, Lamuk Zaveri, Sreenivas Ara, Tulasi Nagabandi, Nitesh Kumar Singh, Karthik Bharadwaj Tallapaka, Divya Tej Sowpati

This study benchmarks nanopore-based DNA methylation detection tools across bacterial, plant, and mammalian datasets, finding older models best for CpG methylation and newer tools better for non-CG methylation.

Nature Communications · Jul 15, 2026Peer-reviewedGenomics

Whole-Genome Landscape of Breast Cancers from India shows Distinct Clinically Actionable Subtypes

Divya Khanna, Arnab Ghosh, Priyanka Bhadwal, Ramakanth Chirravuri-Venkata, Leepakshi Dhingra, Subrata Das, Isha Choubey, Ankita Singh, Geeta Jadaun, Hriday Home Chowdhury, Vibha Mattoo, Pooja Dixit, Suryanshi Tiwari, Safeer Khan, Vinit Gupta, , Shantanu Chowdhury

This study presents whole-genome and transcriptome analyses of breast tumors from India, identifying novel mutations, copy number alterations, and subtypes with clinical implications.

medRxiv · Mar 30, 2026 · PreprintGenetic & Genomic Medicine

An Atlas of Indian Genetic Diversity

Krithika Subramanian, Chandrika Bhattacharyya, Pratheusa Machha, Ankit Mukherjee, Devashish Tripathi, Shreya Chakraborty, Sauma Suvra Majumdar, Shouvanik Sengupta, Priyanka Singh, Vinay More, Shreya Bari, Sreelekshmi MS, Eric Macwan, Debasrija Mondal, Arghya Dey, , Analabha Basu

The paper presents a comprehensive genomic atlas of Indian populations, identifying novel variants and highlighting genetic diversity and pharmacogenomic implications.

medRxiv · Mar 24, 2026 · PreprintGenetic & Genomic Medicine

Host transcriptional response to SARS-CoV-2 infection in COVID-19 patients

Nitesh Kumar Singh, Surabhi Srivastava, Lamuk Zaveri, Thrilok Chander Bingi, Rajarao Mesipogu, Santosh Kumar V., Namami Gaur, Nikhil Hajirnis, Pratheusa Machha, Sakshi Shambhavi, Shagufta Khan, Mamilla Soujanya, Tulasi Nagabandi, Rakesh K. Mishra, Karthik Bharadwaj Tallapaka, Divya Tej Sowpati

This study identifies transcriptional changes in SARS-CoV-2 infected patients, showing upregulation of innate immunity and downregulation of sensory and neuro-related genes, linked to clinical symptoms.

Clinical and Translational Medicine · Sep 1, 2021Peer-reviewedBioinformatics