Author

V. Cvirkaite-Krupovic

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Assay:cryo-EM· 3 Research Focus:protein structure prediction· 2 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:development & morphogenesis· 1 Assay:DNA methylation· 1

Frequent Co-Authors

M. Krupovic· 5 shared F. Wang· 3 shared E. H. Egelman· 2 shared J. Liu· 2 shared D. P. Baquero· 1 shared D. Prangishvili· 1 shared D. Si· 1 shared E. Egelman· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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5 shared papersMicrobiology

M. Krupovic

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Two dramatically distinct archaeal type IV pili structures formed by the same pilin

J. Liu, G. N. Eastep, V. Cvirkaite-Krupovic, S. T. Rich-New, M. A. B. Kreutzberger, E. H. Egelman, M. Krupovic, F. Wang

The paper determines the atomic structures of two distinct archaeal type IV pili formed by the same pilin under different growth conditions, revealing structural flexibility and conformational diversity.

bioRxiv · Aug 7, 2023 · PreprintMicrobiology

DeepTracer ID: De Novo Protein Identification from Cryo-EM Maps

L. Chang, F. Wang, K. Connolly, H. Meng, Z. Su, V. Cvirkaite-Krupovic, M. Krupovic, E. H. Egelman, D. Si

DeepTracer-ID identifies proteins from cryo-EM maps without additional sequence information by combining DeepTracer modeling with AlphaFold2 predictions.

bioRxiv · Jun 3, 2022Biophysics

Archaeal bundling pili of Pyrobaculum calidifontis reveal similarities between archaeal and bacterial biofilms

F. Wang, V. Cvirkaite-Krupovic, M. Krupovic, E. Egelman

This study determines the atomic structure of archaeal bundling pili from Pyrobaculum calidifontis, revealing structural and mechanistic similarities to bacterial biofilm components.

bioRxiv · Apr 22, 2022Biophysics

Archaeal extracellular vesicles are produced in an ESCRT-dependent manner and promote gene transfer and nutrient cycling in extreme environments

J. Liu, V. Cvirkaite-Krupovic, P.-H. Commere, Y. Yang, F. Zhou, Y. Shen, P. Forterre, M. Krupovic

This study shows archaeal extracellular vesicles, produced via ESCRT machinery, transfer DNA and support nutrient cycling in extreme environments.

bioRxiv · Feb 9, 2021Microbiology

New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities

D. P. Baquero, P. Contursi, M. Piochi, S. Bartolucci, Y. Liu, V. Cvirkaite-Krupovic, D. Prangishvili, M. Krupovic

The paper isolates new archaeal viruses from Italian hydrothermal environments and reveals a biogeographic pattern in their distribution.

bioRxiv · Jan 16, 2020Microbiology