Author

Y. Shiraishi

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Bioengineering· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:differential expression· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

S. Imoto· 2 shared S. Miyano· 2 shared Y. Murakami· 2 shared A. E. Carpenter· 1 shared A. Fujimoto· 1 shared A. Niida· 1 shared A. Oku-Sasaki· 1 shared C. Terao· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersCancer Biology

S. Imoto

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Author profile →

3 papers

Recent·Most cited

BioengineeringbioRxivPreprintApr 19, 2022

Predicting gene expression from cell morphology in human induced pluripotent stem cells

T. Wakui, M. Negishi, Y. Murakami…·H. Segawa

The paper builds a model to predict gene expression from cell morphology in hiPSCs and identifies two genes well-predicted by morphology.

DOI 10.1101/2022.04.19.488786

𝕏 PostBluesky

Cancer BiologybioRxivMar 5, 2021

Combined landscape of single-nucleotide variants and copy-number alterations in clonal hematopoiesis

R. Saiki, Y. Momozawa, Y. Nannya…·S. Ogawa

The paper combines SNVs/indels and CNAs analysis in CH to show their co-occurrence and impact on health outcomes.

DOI 10.1038/s41591-021-01411-9

humanwhole-genome sequencing

𝕏 PostBluesky

Cancer BiologybioRxivFeb 22, 2019

Comprehensive Analysis of Indels in Whole-genome Microsatellite Regions and Microsatellite Instability across 21 Cancer Types

A. Fujimoto, M. Fujita, T. Hasegawa…·H. Nakagawa

The paper analyzes microsatellite mutations across 21 cancer types, identifies MSI cancers, and finds factors influencing mutation rates and functional impacts.

DOI 10.1101/gr.255026.119

humanwhole-genome sequencing

𝕏 PostBluesky