Author

Y.-C. Yeh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4 Biochemistry· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:metagenomics· 4 Research Focus:benchmarking· 2 Research Focus:host-pathogen & immune response· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:ecology & biodiversity· 1 Organism:human· 1

Frequent Co-Authors

J. A. Fuhrman· 2 shared J. Fuhrman· 2 shared A. B. Parekh· 1 shared A. G. Grieve· 1 shared A. Long· 1 shared A.-Y. Tsai· 1 shared C. Fletcher-Hoppe· 1 shared C.-h. Hsieh· 1 shared

Activity by Year

2017-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 6 mutual co-author links

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2 shared papersMicrobiology

J. A. Fuhrman

Mutual co-authors in cluster

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6 papers

Recent·Most cited

Symbiotic diazotrophic UCYN-A strains co-occurred with El Niño, relaxed upwelling, and varied eukaryotes over 10 years off Southern California Bight

C. Fletcher-Hoppe, Y.-C. Yeh, Y. Raut, J. L. Weissman, J. Fuhrman

The paper examines UCYN-A symbioses over 10 years, finding increased UCYN-A1 abundance post-El Niño and associations with dinoflagellates and varying hosts.

bioRxiv · Nov 7, 2022 · PreprintMicrobiology

Trade-off between competition ability and invulnerability to predation in marine microbes; protist grazing versus viral lysis effects

J. W. Yang, F.-H. Chang, Y.-C. Yeh, A.-Y. Tsai, K.-P. Chiang, F.-K. Shiah, G.-C. Gong, C.-h. Hsieh

The paper investigates trade-offs between bacterial competitiveness and predation invulnerability in marine communities, finding stronger trade-offs under viral lysis than protist grazing.

bioRxiv · Oct 9, 2021 · PreprintEcology

Ribosome-linked mRNA-rRNA chimeras reveal active novel virus-host associations.

J. C. Ignacio-Espinoza, S. Laperriere, Y.-C. Yeh, J. Weissman, S. Hou, A. Long, J. A. Fuhrman

The paper links marine viral gene expression to specific hosts using mRNA-rRNA chimeras, identifying novel virus-host associations and validating the method's accuracy.

bioRxiv · Oct 30, 2020 · PreprintMicrobiology

Conformational surveillance of Orai1 by a rhomboid intramembrane protease prevents inappropriate CRAC channel activation

A. G. Grieve, Y.-C. Yeh, L. Zarcone, J. Breuning, N. Johnson, K. Strisovsky, M. H. Brown, A. B. Parekh, M. Freeman

The paper identifies RHBDL2 as a rhomboid protease that surveils and cleaves active Orai1 to prevent inappropriate CRAC channel activation, maintaining proper T cell signaling.

bioRxiv · Apr 4, 2020Biochemistry

Comprehensive single-PCR 16S and 18S rRNA community analysis validated with mock communities and denoising algorithms

Y.-C. Yeh, J. C. McNichol, D. M. Needham, E. B. Fichot, J. A. Fuhrman

The paper validates universal 16S and 18S rRNA primers for comprehensive microbial community profiling using mock communities and shows their effectiveness over eukaryote-specific primers.

bioRxiv · Dec 6, 2019 · PreprintMicrobiology

Taxon disappearance from microbiome analysis indicates need for mock communities as a standard in every sequencing run

Y.-C. Yeh, D. Needham, E. Sieradzki, J. Fuhrman

The paper demonstrates that routine use of mock communities in microbiome sequencing detects hidden biases and aberrations that could otherwise go undetected, highlighting their necessity as a standard in every sequencing run.

bioRxiv · Oct 19, 2017Microbiology