Author

Yannick Baffert

Lyon 1 Université

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Approach:statistical model· 1

Frequent Co-Authors

Annick Berne-DedieuiD· 2 shared Christian LesterliniD· 2 shared Sarah BigotiD· 2 shared Adeline PageiD· 1 shared Allison J. LopatkiniD· 1 shared Bogdan Iuliu IorgaiD· 1 shared Chloé VirolleiD· 1 shared Daouda A. K. TraoréiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersMicrobiology

Annick Berne-DedieuORCID

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2 papers

Recent·Most cited

Plasmid-encoded host reprogramming promotes plasmid dissemination

Chloé Virolle, Sibylle Ferrarin, Gaël Panis, Yannick Baffert, Annick Berne-Dedieu, Jérémy Guérin, Julien Cayron, Daouda A. K. Traoré, Sofía Martínez‐Absalón, Rania Zenati, Frédéric Delolme, Adeline Page, Sarah Bigot, Yoshiharu Yamaichi, Allison J. Lopatkin, , Christian Lesterlin

The paper identifies YfjB as a host reprogramming factor that enables plasmid dissemination by altering host transcription and metabolism.

bioRxiv · Jul 7, 2026 · PreprintMicrobiology

Genetic Determinants of pOXA-48 Plasmid Maintenance and Propagation in Escherichia coli

Yannick Baffert, Nathan Fraikin, Yasmine Makhloufi, Julie Baltenneck, Marie‐Eve Val, Annick Berne-Dedieu, Jonathan Degosserie, Bogdan Iuliu Iorga, Pierre Bogaerts, Erwan Gueguen, Christian Lesterlin, Sarah Bigot

This study identifies genetic elements critical for pOXA-48 plasmid stability, replication, and conjugative transfer using transposon sequencing.

Nature Communications · Aug 19, 2025Peer-reviewedMicrobiology