Author

Yu Bao

Harbin Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Molecular Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Approach:experimental assay· 1 Organism:human· 1

Frequent Co-Authors

Alastair CrispiD· 1 shared Ana Tufegdžić VidakovićiD· 1 shared Anna EdmondsoniD· 1 shared Bibo Cai· 1 shared Bing QiniD· 1 shared Daniela CastiblancoiD· 1 shared Iván Shlamovitz· 1 shared Junhao Gao· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperMolecular Biology

Alastair CrispORCID

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2 papers

Recent·Most cited

Causal event structure shapes convergent reactivation signatures in human cortex and language model

Zihan Zhang, YuTing Chen, Qiuyi Liu, Xinyi Zhao, Xiao Ding, Xiaoyu Fei, Juntong Du, Yu Bao, Junhao Gao, Xingqi Huang, Bibo Cai, Xia Liang, Bing Qin, Ting Liu

This study compares how causal knowledge is represented in human brain and large language models through reactivation patterns and finds similar intrinsic manifold structures.

bioRxiv · Oct 7, 2026 · PreprintNeuroscience

Stalling of elongating Pol II triggers Ser7 phosphorylation in trans to drive transcription recovery

Iván Shlamovitz, Yu Bao, Tea Toteva, Alastair Crisp, Shutong Ye, Steven Wingett, Roberta Cacioppo, Anna Edmondson, Daniela Castiblanco, Michael A. Boemo, Ana Tufegdžić Vidaković

The paper identifies a third mechanism for resolving stalled RNA polymerase II by showing that transcription stalling triggers GSK3-mediated phosphorylation of Ser7 on Pol II, which primes incoming Pol II for efficient elongation.

bioRxiv · Dec 5, 2025 · PreprintMolecular Biology