Author

Ziyu Wang

Massachusetts Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

Click to filter author papers

Neuroscience· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:C. elegans· 2 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Approach:deep learning· 1 Assay:electronic health records· 1 Assay:imaging· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Adam A. AtanasiD· 2 shared Cassi Estrem· 2 shared Di Kang· 2 shared Eric BuenoiD· 2 shared Steven W. FlavelliD· 2 shared Cong PianiD· 1 shared Emma K. TowlsoniD· 1 shared Ijeoma NwabudikeiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersNeuroscience

Adam A. AtanasORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

AIPAMPDS: an AI platform for antimicrobial peptide design and screening

Yanru Li, Liming Gao, Zhao Wenqian, Ziyu Wang, Xiaofang Xu, Jinwen Ji, Yuan Zhang, Yufeng Liu, Liangyun Zhang, Yong Yang, Jinhu Huang, Cong Pian

AIPAMPDS designs and screens antimicrobial peptides using AI, identifying 10 lead peptides with high antimicrobial activity and low hemolysis.

bioRxiv · Mar 24, 2025 · PreprintBioinformatics

Dissecting the Functional Organization of the C. elegans Serotonergic System at Whole-Brain Scale

Ugur Dag, Ijeoma Nwabudike, Di Kang, Matthew A. Gomes, Jung Soo Kim, Adam A. Atanas, Eric Bueno, Cassi Estrem, Sarah M. Pugliese, Ziyu Wang, Emma K. Towlson, Steven W. Flavell

The paper investigates how serotonin release from a specific neuron in C. elegans affects whole-brain activity and behavior by identifying core and interacting serotonin receptors and mapping their expression and functional roles.

Cell · May 15, 2023Peer-reviewedNeuroscience

Brain-wide representations of behavior spanning multiple timescales and states in C. elegans

Adam A. Atanas, Jungsoo Kim, Ziyu Wang, Eric Bueno, McCoy R. Becker, Di Kang, Jungyeon Park, Cassi Estrem, Talya S Kramer, Saba Baskoylu, Vikash K. Mansingkha, Steven W. Flavell

The paper maps how neuron classes in C. elegans encode behavior across different states and timescales using brain-wide activity recordings and probabilistic models.

bioRxiv · Nov 11, 2022 · PreprintNeuroscience