Author

Thorben Schramm

ETH ZurichORCID 0000-0001-5013-6705Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:benchmarking· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:perturbation response prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

Hannes LinkiD· 1 shared Ludovic C. J. GilletiD· 1 shared Matthias GstaigeriD· 1 shared Natalie de SouzaiD· 1 shared Paola PicottiiD· 1 shared Vanessa PahliD· 1 shared Viviane ReberiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 11 mutual co-author links

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1 shared paperSystems Biology

Hannes LinkORCID

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2 papers

Recent·Most cited

BiochemistrybioRxivPreprintMar 30, 2026

In-source fragmentation in mass spectrometry-based proteomics: prevalence, impact, and strategies for mitigation

Thorben Schramm, Ludovic C. J. Gillet, Viviane Reber…·Paola Picotti

The paper identifies and quantifies in-source fragmentation (ISF) in proteomics data, showing its prevalence and impact, and proposes an open-source method to detect and remove ISF peptides.

DOI 10.64898/2026.03.27.714398

proteomicsstatistical model

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Systems BiologybioRxivPreprintJun 1, 2023

Mapping temperature-sensitive mutations at a genome-scale to engineer growth-switches in E. coli

Thorben Schramm, Vanessa Pahl, Hannes Link

The paper constructs a CRISPR library of E. coli mutants to identify temperature-sensitive mutants and demonstrates their use in engineering bacterial metabolite production.

1 citation

E. coliproteomics

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