Author

Arjun Scott Nanda

Gladstone InstitutesORCID 0000-0001-5014-3104Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Organism:human· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Hani GoodarziiD· 2 shared Ke WuiD· 2 shared Megan S OstrowskiiD· 2 shared Sivakanthan KasinathaniD· 2 shared Vijay RamaniiD· 2 shared Adam P GiessiD· 1 shared Afshan SiddiqiD· 1 shared Alejandro Sweet-CorderoiD· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenomics

Hani GoodarziORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintAug 7, 2022

Sensitive multimodal profiling of native DNA by transposase-mediated single-molecule sequencing

Arjun Scott Nanda, Ke Wu, Sivakanthan Kasinathan…·Vijay Ramani

SMRT-Tag enables low-input, single-molecule sequencing for simultaneous detection of genetic and epigenetic variations in human samples.

DOI 10.1101/2022.08.07.502893

humanlong-read sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 10, 2021

Single-fiber nucleosome density shapes the regulatory output of a mammalian chromatin remodeling enzyme

Nour J. Abdulhay, Laura J Hsieh, Colin P McNally…·Vijay Ramani

This study uses a single-molecule platform to show that SNF2h, a chromatin remodeler, regulates DNA accessibility based on nucleosome density in vitro and in vivo.

5 citations

𝕏 PostBluesky

GenomicsNature CancerPeer-reviewedApr 26, 2021

Dissecting mutational mechanisms underpinning signatures caused by replication errors and endogenous DNA damage

Xueqing Zou, Ching Chiek Koh, Arjun Scott Nanda…·Magdalena Zarowiecki

The paper identifies gene-specific mutational signatures caused by replication errors and endogenous DNA damage using CRISPR-Cas9 knockouts and whole-genome sequencing.

160 citationstop 1%

humanwhole-genome sequencing

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