Author

Yi-Yuan Lee

Carnegie Mellon UniversityORCID 0000-0001-5067-7085Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metabolomics· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1 Assay:proteomics· 1

Frequent Co-Authors

A. M. SalehiD· 1 shared Aaron T. TimpermaniD· 1 shared Adarsh SinghiD· 1 shared Alexey A. GurevichiD· 1 shared Azat TagirdzhanoviD· 1 shared Hosein MohimaniiD· 1 shared Ilana BritoiD· 1 shared Jiucheng DingiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperMicrobiology

A. M. SalehORCID

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintJul 3, 2026

Integrated multi-omics profiling of gut bacterial extracellular vesicles links cargo composition to host transcriptional responses

Adarsh Singh, Yanjia Zhang, Jiucheng Ding…·Ilana Brito

The paper profiles gut bacterial extracellular vesicles (bEVs) and links their cargo composition to host transcriptional responses across different cell types.

DOI 10.64898/2026.07.01.732738

humanmetagenomics

𝕏 PostBluesky

BioinformaticsNature CommunicationsPeer-reviewedJun 17, 2021

MolDiscovery: Learning Mass Spectrometry Fragmentation of Small Molecules

Liu Cao, Mustafa Güler, Azat Tagirdzhanov…·Hosein Mohimani

molDiscovery improves small molecule identification by learning fragmentation patterns from mass spectra, achieving higher efficiency and accuracy than existing methods.

120 citationstop 1%

metabolomicsstatistical model

𝕏 PostBluesky