Jan A. Traas

This paper benchmarks deep learning algorithms for 3D instance segmentation of confocal images, showing performance differences and advantages of end-to-end 3D methods.

The paper creates a 4-D atlas of early Arabidopsis flower development and uses computational models to identify gene regulatory hypotheses and growth mechanisms.

The paper shows that microtubule alignment along mechanical stress patterns in internal walls governs the three-dimensional geometry of thin leaf blades.