AlphaGenome identifies a deep intronic variant in a family with PLA2G6-associated neurodegeneration: Closing the diagnostic gap in rare genetic diseases
Sarah J. Eger, Greizy López, Luisa Fernanda Gómez Navarro…·Kenneth S. Kosik
Author
HudsonAlpha Institute for BiotechnologyORCID 0000-0001-5214-6747Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
12 papers
Recent·Most cited
Sarah J. Eger, Greizy López, Luisa Fernanda Gómez Navarro…·Kenneth S. Kosik
Bradford C. Powell, Laura M. Amendola, Katherine E. Bonini…·Kevin M. Bowling
The paper develops a standardized case-level categorization metric for genomic results across the CSER2 consortium to assess diagnostic yield and identify resolvable factors in inconclusive cases.
Susan M. Hiatt, James M.J. Lawlor, Lori H. Handley…·Gregory M. Cooper
This study shows that long-read genome sequencing improves diagnostic yield for neurodevelopmental disorders by identifying variants missed by short-read sequencing.
Maolei Gong, Jiayi Li, Yijun Liu…·Xiaoli Chen
This study identifies MARK2 variants as a cause of autism spectrum disorder by showing they disrupt the WNT/β-catenin signaling pathway and impair neural development.
Stephanie A. Felker, James M.J. Lawlor, Susan M. Hiatt…·Gregory M. Cooper
The paper identifies clinically relevant variants in poison exons (PEs) that improve diagnostic yield for neurodevelopmental disorders by uncovering variants previously overlooked in standard analyses.
Susan M. Hiatt, Slavica Trajkova, Matteo Rossi Sebastiano…·Gregory M. Cooper
The paper identifies ZMYM3 variants in 22 individuals with neurodevelopmental delay, showing recurrent mutations, phenotypic overlap, and functional effects, supporting ZMYM3 as a novel NDD gene.
Kevin M. Bowling, Michelle L. Thompson, Candice R. Finnila…·Gregory M. Cooper
This study evaluates genome sequencing in hospitalized newborns, finding it more effective than standard care in identifying genetic diagnoses, especially in those with specific phenotypes.
Susan M. Hiatt, James M.J. Lawlor, Lori H. Handley…·Gregory M. Cooper
This paper uses long-read genome sequencing to identify pathogenic variants in neurodevelopmental disorders, finding clinically relevant structural variants in two of six probands.
Norine Voisin, Rhonda E. Schnur, Sofia Douzgou…·Alexandre Reymond
The paper identifies degron variants in AFF3 causing a multi-system disorder with specific clinical features and demonstrates phenotypic overlap with AFF4-related syndromes.
Susan M. Hiatt, Matthew B. Neu, Ryne C. Ramaker…·Gregory M. Cooper
The paper identifies de novo mutations in RALA, a RAS-like GTPase, as a cause of intellectual disability and developmental delay, showing their functional impact on GTP binding and effector interactions.
Michelle L. Thompson, Candice R. Finnila, Kevin M. Bowling…·Gregory M. Cooper
The paper reports secondary findings in parents of children with developmental delay through genomic sequencing, identifying clinically relevant variants in 9% of participants.
Kevin M. Bowling, Michelle L. Thompson, Michelle D. Amaral…·Gregory M. Cooper
This study analyzes genomic data from 371 children with intellectual disability or developmental delay to identify pathogenic variants and assess diagnostic utility.