Author

James P. Reddington

European Molecular Biology LaboratoryORCID 0000-0001-5317-4600Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 3

Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 2 Research Focus:cell type annotation· 2 Organism:Drosophila· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Eileen E. M. FurlongiD· 2 shared Annique ClaringbouldiD· 1 shared Bingqing ZhaoiD· 1 shared Cole TrapnelliD· 1 shared Darren A. CusanovichiD· 1 shared David A. Garfield· 1 shared Delasa Aghamirzaie· 1 shared Frank J. Steemers· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersGenomics

Eileen E. M. FurlongORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintOct 30, 2025

Integrative Multi-Omics Identifies CDK1 as a Key Signaling Regulator of CD4+ T Cell Effector Function

Nila H. Servaas, Hanke Gwendolyn Bauersachs, Luisa Abreu…·Judith B. Zaugg

This study identifies CDK1 as a key regulator of CD4+ T cell effector function through integrative multi-omics analysis, showing its role in linking phosphorylation to gene regulation and immune traits.

DOI 10.1101/2025.10.30.685551

humanproteomics

𝕏 PostBluesky

GenomicsGenome biologyPeer-reviewedJan 6, 2022

scDALI: Modelling allelic heterogeneity of DNA accessibility in single-cells reveals context-specific genetic regulation

T. Heinen, Stefano Secchia, James P. Reddington…·Oliver Stegle

scDALI models allelic heterogeneity in single-cell chromatin accessibility to identify context-specific genetic regulation.

26 citations

DrosophilascATAC-seq

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GenomicsNaturePeer-reviewedMar 1, 2018

The cis-regulatory dynamics of embryonic development at single cell resolution

Darren A. Cusanovich, James P. Reddington, David A. Garfield…·Eileen E. M. Furlong

The paper profiles chromatin accessibility in Drosophila embryos to uncover cis-regulatory programs and cell fate determinants during development.

362 citationstop 1%

DrosophilaATAC-seq

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