Yohei Nishikawa

The paper uses single-cell genomics to identify Enterobacterales bacteria in soybean rhizoplane soils associated with red crown rot, showing they carry cationic antimicrobial peptide resistance genes.

The paper uses single-cell genomics to analyze virus-host interactions in freshwater bacteria, revealing differences in infection rates and defense strategies between copiotrophs and oligotrophs.

This study uses a new single-virus sequencing platform to identify diverse viral genomes in river water, revealing novel species and gene transfer patterns.

The paper develops a single-cell genome sequencing platform, SAG-gel, to analyze microbial diversity in Red Sea environments, revealing 734 partial genomes from 231 species, most of which are newly identified.

The paper uses multi-omics data to analyze cross-organism interactions in coral holobionts, revealing host dominance over zooxanthellae and immune responses triggered by Endozoicomonas bacteria.