Jian Liu

This paper develops CPMP, a weakly supervised transformer model, to predict MammaPrint recurrence risk from breast cancer histopathological slides, achieving an AUROC of 0.824.

This study investigates the genomic and genetic factors underlying speciation and pigment pattern diversification in Danio fishes, revealing introgression, functional divergence of specific genes, and evolutionary changes in protein and regulatory sequences.

The paper establishes a single-cell atlas of breast cancer in young Chinese women, identifies new subtypes and therapeutic targets, and reveals distinct tumor progression patterns.

This study uses scRNA-seq and scATAC-seq to analyze cellular heterogeneity and chromatin accessibility changes in young breast cancer patients before and after neoadjuvant therapy, identifying therapy-resistant genes and signaling pathways.

NeoTCR is a database of experimentally validated neoantigen-specific TCR sequences across 18 cancer types, enabling query and analysis of TCR-clonotypes and neoantigen associations.