Author

Hanna Fokt

Christian-Albrechts-Universität zu KielORCID 0000-0001-5659-6219Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

John F. BainesiD· 3 shared André FrankeiD· 1 shared Axel KünstneriD· 1 shared Birhanu M. KinfuiD· 1 shared Cecilia J. ChungiD· 1 shared Christos ZioutisiD· 1 shared David BerryiD· 1 shared Ekaterina Kolodyazhnaya· 1 shared

Activity by Year

2022-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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3 shared papersMicrobiology

John F. BainesORCID

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3 papers

Recent·Most cited

MicrobiologymicroLifePeer-reviewedDec 10, 2025

Exploring new Bacteroidota strains: Functional Diversity and Probiotic Characteristics

Lisa Ladewig, Birhanu M. Kinfu, Hanna Fokt…·Ruth A. Schmitz

This study evaluates 42 new Bacteroidota strains for probiotic potential, finding they inhibit biofilm formation and exhibit quorum quenching and bile salt hydrolase activity.

4 citations

mousehuman

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MicrobiologybioRxivPreprintJun 24, 2025

Rapid genetic diversification of Bacteroides thetaiotaomicron in mono-associated mice revealed through deep population-level sequencing

Christos Zioutis, Michaela Lang, Fátima C. Pereira…·David Berry

This study tracks rapid genetic diversification of Bacteroides thetaiotaomicron in mono-associated mice over 28 days, identifying polymorphisms, phase-variable loci, and spatial variation in the gut.

1 citation

mousewhole-genome sequencing

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GeneticseLifePeer-reviewedJun 14, 2022

Key features of the genetic architecture and evolution of host-microbe interactions revealed by high-resolution genetic mapping of the mucosa-associated gut microbiome in hybrid mice

Shauni Doms, Hanna Fokt, Malte Christoph Rühlemann…·John F. Baines

The paper uses genetic mapping in hybrid mice to show host genetics shape gut microbiome traits, identifies 443 loci influencing 123 taxa, and finds disease-related genes.

16 citations

mousebulk RNA-seq

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