Author

Yue Xu

Tongji UniversityORCID 0000-0001-5953-4830Unclaimed ORCID profile · follow to get notified of new preprints

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Yue Xu9 papers · Shanghai Jiao Tong University

Biology Disciplines

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Bioinformatics· 2 Developmental Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Assay:bulk RNA-seq· 2 Research Focus:drug response / drug discovery· 2 Approach:statistical model· 2 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Haiyun WangiD· 2 shared Jie ZhengiD· 2 shared Tao WuiD· 2 shared Bin Jiang· 1 shared Bingyue ZhangiD· 1 shared Chang Wang· 1 shared Chenming XuiD· 1 shared Chiara AmbrogioiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Haiyun WangORCID

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3 papers

Recent·Most cited

Developmental BiologyNaturePeer-reviewedMay 27, 2026

Spatiotemporal transcriptome atlas of human embryos after gastrulation

Jiexue Pan, Yuejiao Li, Zhongliang Lin…·Hefeng Huang

The paper creates a spatiotemporal transcriptome atlas of human embryos after gastrulation, revealing organ-specific regulons and regulatory networks during development.

17 citationstop 1%

humanspatial transcriptomics

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BioinformaticsAdvanced SciencePeer-reviewedNov 19, 2024

scPharm: identifying pharmacological subpopulations of single cells for precision medicine in cancers

Peng Tian, Jie Zheng, Keying Qiao…·Haiyun Wang

scPharm integrates pharmacogenomics profiles with scRNA-seq data to identify drug-sensitive subpopulations in cancer tissues and predict combination therapies.

2 citations

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BioinformaticsbioRxivPreprintMar 2, 2021

Drug-driven reclassification of multiple tumour subtypes reveals intrinsic molecular concordance of therapy across histologically disparate cancers

Yue Xu, Jie Zheng, Zhaoqing Cai…·Haiyun Wang

This study reclassifies tumors based on drug response and genomic alterations, revealing molecular concordance in therapy across histologically different cancers.

DOI 10.1101/2021.03.02.433516

humanbulk RNA-seq

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