Author

Tommaso Mari

Max Delbrück CenterORCID 0000-0001-6011-9386Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:cell type annotation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Assay:protein structure· 1

Frequent Co-Authors

Matthias SelbachiD· 3 shared Christian DrosteniD· 2 shared Emanuel WyleriD· 2 shared Kirstin Mösbauer· 2 shared Markus LandthaleriD· 2 shared Altuna AkaliniD· 1 shared Andranik IvanoviD· 1 shared Andreas Christian HockeiD· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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3 shared papersCell Biology

Matthias SelbachORCID

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3 papers

Recent·Most cited

Cell BiologyNAR Molecular MedicinePeer-reviewedMar 11, 2025

Neuromuscular dysfunction in patient-derived FUSR244RR-ALS iPSC model via axonal downregulation of neuromuscular junction proteins

Nicolai von Kügelgen, Katarzyna Anna Ludwik, Samantha Mendonsa…·Marina Chekulaeva

The paper establishes an ALS hiPSC model showing axonal downregulation of neuromuscular junction proteins and identifies FUS binding to their mRNAs.

1 citation

humanbulk RNA-seq

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BioinformaticsJournal of Proteome ResearchPeer-reviewedMay 24, 2022

In vitro Kinase-to-Phosphosite database (iKiP-DB) predicts kinase activity in phosphoproteomic datasets

Tommaso Mari, Kirstin Mösbauer, Emanuel Wyler…·Matthias Selbach

The paper introduces iKiP-DB, a database that predicts kinase activity from phosphoproteomic data, showing its effectiveness in analyzing both well-known and understudied kinases.

70 citations

humanproteomics

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Systems BiologyiSciencePeer-reviewedFeb 7, 2021

Bulk and single-cell gene expression profiling of SARS-CoV-2 infected human cell lines identifies molecular targets for therapeutic intervention

Emanuel Wyler, Kirstin Mösbauer, Vedran Franke…·Markus Landthaler

The paper uses bulk and single-cell transcriptomics to analyze SARS-CoV-2 infection in human cell lines, identifying HSP90 as a potential therapeutic target.

317 citationstop 1%

humanbulk RNA-seq

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