Author

Vinod Kumar Yadav

The Jackson Laboratory for Genomic MedicineORCID 0000-0001-6450-7036Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Al Simons· 1 shared Anuj SrivastavaiD· 1 shared Bo JiiD· 1 shared Carol J. BultiD· 1 shared Edison T. LiuiD· 1 shared Floris P BartheliD· 1 shared Francesca MenghiiD· 1 shared Glen Beane· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Al Simons

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2 papers

Recent·Most cited

BioinformaticsBMC Medical GenomicsPeer-reviewedJul 1, 2019

Bioinformatics workflows for genomic analysis of tumors from Patient Derived Xenografts (PDX): challenges and guidelines

Xing Yi Woo, Anuj Srivastava, Joel H. Graber…·Carol J. Bult

The paper develops bioinformatics workflows to analyze genomic data from patient-derived xenografts, addressing challenges like separating mouse and human reads and identifying somatic mutations without paired normal DNA.

48 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsCancer CellPeer-reviewedJul 14, 2018

The Tandem Duplicator Phenotype is a prevalent genome-wide cancer configuration driven by distinct gene mutations

Francesca Menghi, Floris P Barthel, Vinod Kumar Yadav…·Edison T. Liu

The paper identifies three span intervals of tandem duplications in TDP tumors and links them to specific gene mutations and pathways, showing TP53 and BRCA1 loss drives short-span TDPs.

174 citationstop 2%

mousewhole-genome sequencing

𝕏 PostBluesky