Tue Kjærgaard Nielsen

This study identifies an accessory chromosome in Metarhizium acridum that contains genes related to sexual reproduction and may facilitate homothallism.

The paper presents DeFluorX, a pipeline using Boltz-2 to identify FAcD variants for PFAS defluorination by analyzing geometric and energetic factors in enzyme-PFAS complexes.

This study identifies a microbial consortium capable of degrading trifluoroacetate (TFA) by enriching for microorganisms that can metabolize structurally similar compounds.

The paper uses whole genome sequencing of soft rot Pectobacteriaceae isolates from Danish potato farms to trace disease spread and identify potential phage-based biocontrol strategies.

The paper quantifies bacterial genetic responses to stress using single-strain mobilome sequencing, revealing increased activity of IS elements, prophages, and other mobile genetic elements under copper and SDS stress.

The paper identifies mobilized genes for PFAS-degradation enzymes in cyanobacteria and suggests positive selection driven by stress mitigation rather than metabolic benefit.

The paper examines cultivar-dependent Pseudomonas microdiversity in wheat rhizosphere, linking it to disease resistance and root diameter.

This study explores using CRISPR-Cas to target class 1 integrons in multidrug-resistant bacteria to re-sensitize them to antibiotics by removing resistance genes.

The paper presents the complete genome sequence of Rhodococcus sp. USK10, which can fully mineralize Benzophenone-3, a UV filter harmful to aquatic life.

This paper presents the complete genome sequence of Aminobacter sp. MSH1, revealing its genomic structure and plasmid dynamics related to BAM degradation.