The complete genome of a songbird
Giulio Formenti, Nivesh Jain, Jack A Medico…·Erich David Jarvis
This paper presents the first fully phased, diploid, telomere-to-telomere genome of the zebra finch, revealing new genes and structural features.
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ITMO UniversityORCID 0000-0001-6981-7316Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
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Giulio Formenti, Nivesh Jain, Jack A Medico…·Erich David Jarvis
This paper presents the first fully phased, diploid, telomere-to-telomere genome of the zebra finch, revealing new genes and structural features.
Giulio Formenti, Dominic E. Absolon, Linelle Ann L. Abueg…·Fergal J. Martin
The Vertebrate Genomes Project Phase I provides high-quality reference genomes for 816 species, enabling evolutionary and conservation insights across vertebrates.
Audrey J. Majeske, Alejandro J. Mercado Capote, Aleksey S. Komissarov…·Tarás K. Oleksyk
The paper sequences the mitochondrial genome of Diadema antillarum and performs phylogenetic analysis to assess familial relationships among sea urchins.
Polina D. Kuchur, Anna I. Churkina, Anna A. Rybina, Aleksey S. Komissarov
The paper identifies and compares O-antigen operons in Providencia species to explore their association with bacterial virulence and lifestyle.
Qussai Abbas, Кусакин Алексей Викторович, Kinda Ali Sharrouf…·Aleksey S. Komissarov
This study characterizes mutations in SARS-CoV-2 Omicron lineages BA.1, BA.2, BA.3, and BA.1.1, highlighting non-spike mutations and their implications for transmissibility and immune evasion.
Subhrajit Barua, Aleksey S. Komissarov, Harpreet Kaur, Elia Brodsky
The paper examines the impact of simulated microgravity on DNA damage response in zebrafish embryos and compares it to human spaceflight effects observed in the NASA twin study.
Mikhail Rayko, Aleksey S. Komissarov
The paper identifies singleton variants in SARS-CoV-2 genomes submitted to GISAID and suggests caution in their inclusion due to potential impact on mutation rate and tree topology estimates.