Author

Jonasz B. Patkowski

Imperial College LondonORCID 0000-0001-7301-1569Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 3 Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:development & morphogenesis· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Tiago R. D. CostaiD· 3 shared José R. PenadésiD· 2 shared Lingchen HeiD· 2 shared Alan KarthikesalingamiD· 1 shared Alexander DaryiniD· 1 shared Alfred Fillol-SalomiD· 1 shared Anatoly Myaskovsky· 1 shared Anil K. PalepuiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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3 shared papersMicrobiology

Tiago R. D. CostaORCID

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3 papers

Recent·Most cited

MicrobiologybioRxivPreprintFeb 21, 2026

Relaxase Asymmetry Drives Initiation of Bacterial Conjugation

Danylo Gorenkin, Ruina Liang, Jonasz B. Patkowski…·Aravindan Ilangovan

The paper identifies the functionally asymmetric TraI homodimer structure and elucidates how strand nicking and helicase loading are coordinated during bacterial conjugation.

DOI 10.64898/2026.02.20.706640

bacteria (other)structural biology

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MicrobiologyCellPeer-reviewedSep 9, 2025

AI mirrors experimental science to uncover a novel mechanism of gene transfer crucial to bacterial evolution

José R. Penadés, Juraj Gottweis, Lingchen He…·Tiago R. D. Costa

This paper tests an AI's ability to generate hypotheses about bacterial gene transfer mechanisms, finding it matches experimentally confirmed results.

42 citationstop 1%

bacteria (other)machine learning (classical)

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MicrobiologyCellPeer-reviewedSep 9, 2025

Chimeric infective particles expand species boundaries in phage inducible chromosomal island mobilization

Lingchen He, Jonasz B. Patkowski, Jinlong Wang…·José R. Penadés

The paper identifies chimeric infective particles formed by cf-PICIs that enable horizontal transfer between bacterial species.

18 citationstop 1%

bacteria (other)experimental assay

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