Author

Poonam Thakran

National Institutes of HealthORCID 0000-0001-7348-9677Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexandra ZhangiD· 1 shared Ganesha RaiiD· 1 shared Isaac W. VockiD· 1 shared Isabelle Nathalie-Marie LeibleriD· 1 shared J. Robert HoggiD· 1 shared James IngleseiD· 1 shared Justin W. MabiniD· 1 shared Martin MachynaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperMolecular Biology

Alexandra ZhangORCID

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1 paper

Recent·Most cited

Uncovering the isoform-resolution kinetic landscape of nonsense-mediated mRNA decay with EZbakR

Justin W. Mabin, Isaac W. Vock, Martin Machyna, Nazmul Haque, Poonam Thakran, Alexandra Zhang, Ganesha Rai, Isabelle Nathalie-Marie Leibler, James Inglese, Matthew D. Simon, J. Robert Hogg

The paper introduces a method to infer isoform-level kinetics of nonsense-mediated mRNA decay using short-read NR-seq data, revealing variability in NMD efficiency and decay rates of transcripts with and without PTCs.

Genome biology · Jul 15, 2026Peer-reviewedMolecular Biology