Author

Deni Szokoli

Stanford MedicineORCID 0000-0001-7477-0217Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein structure prediction· 1 Assay:proteomics· 1 Assay:structural biology· 1

Frequent Co-Authors

Adamo S. MancinoiD· 1 shared Boris RudolfsiD· 1 shared Daniel B. HaackiD· 1 shared Hannes MutschleriD· 1 shared Jason HingeyiD· 1 shared Navtej TooriD· 1 shared Nicholas SpellmoniD· 1 shared Rhiju DasiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperBiochemistry

Adamo S. MancinoORCID

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2 papers

Recent·Most cited

BiochemistrybioRxivPreprintAug 19, 2026

Cryo-EM of a nucleotide-polymerizing ribozyme enables its predictive improvement

Deni Szokoli, Jason Hingey, Yuan Wu…·Rhiju Das

The paper uses cryo-EM to study a ribozyme's structure, revealing how it evolved to polymerize nucleotides and how mutations can enhance its function.

1 citation

structural biologyexperimental assay

𝕏 PostBluesky

BiochemistryNucleic Acids ResearchPeer-reviewedNov 27, 2024

Protein-Free Catalysis of DNA Hydrolysis and Self-Integration by a Ribozyme

Deni Szokoli, Hannes Mutschler

This study shows a group II intron can perform DNA hydrolysis and self-integration without protein cofactors, expanding its catalytic capabilities and suggesting a protein-free origin.

3 citations

DNA methylationproteomics

𝕏 PostBluesky