Murillo F. Rodrigues

The paper presents the first telomere-to-telomere genome for the common marmoset, revealing genomic features and a pangenome resource for biomedical research.

pg_gpu accelerates population genetics statistics on GPUs, achieving significant speedups over CPU implementations while maintaining accuracy.

The paper analyzes the genetic diversity and population structure of US marmosets, revealing pre-colony population structure and generating a pedigree-based recombination map.

The paper quantifies how gene flow and selection shape spatial genomic structure over time in Drosophila melanogaster, finding widespread homogenization and preservation of adaptive loci.

The paper introduces a SLiM 5 model for simulating whole-genome human evolution, including sex chromosomes and mitochondrial DNA, and demonstrates its utility through simple analyses.

The paper introduces the use of tree sequences from the forwards simulator SLiM to enable interoperability between forward-in-time and coalescent simulations.

The paper extends the stdpopsim simulation framework to include realistic selection models, enabling studies of selection's impact on genetic variation across species.

The paper expands the stdpopsim species catalog and improves genome simulations by adding non-crossover recombination and species-specific annotations, making simulations more realistic for non-model organisms.

The paper introduces msprime 1.0, a high-performance simulation tool for ancestry and mutation in population genetics, showing it is faster and more memory efficient than existing alternatives.