Author

Philipp Sebastian Jurmeister

Pathologisches InstitutORCID 0000-0001-7745-3794Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Frederick KlauscheniD· 3 shared Anastasiya BoltengageniD· 1 shared Andreas MöckiD· 1 shared Andrew WoehleriD· 1 shared Anna KübleriD· 1 shared Anton Burkhard‐MeieriD· 1 shared Carolin MogleriD· 1 shared Christoph GeisenbergeriD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 22 mutual co-author links

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3 shared papersCancer Biology

Frederick KlauschenORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 5, 2026

Matched primary-metastasis single-nucleus and spatial profiling of leiomyosarcoma identifies antigen-presenting fibroblasts at the tumor-organ interface

Anna Kübler, Linda Bergmayr, Thomas Knösel…·Andreas Möck

This study uses single-nucleus RNA sequencing and spatial transcriptomics to compare primary and metastatic leiomyosarcoma, identifying antigen-presenting fibroblasts associated with metastasis.

DOI 10.64898/2026.10.02.754332

humanscRNA-seq

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Molecular BiologyBiology Methods and ProtocolsPeer-reviewedJan 1, 2025

A cost-effective and scalable approach for DNA extraction from FFPE tissues

Christoph Geisenberger, Edgar Chimal, Philipp Sebastian Jurmeister, Frederick Klauschen

This paper presents a high-throughput DNA extraction method for FFPE tissues that is cost-effective and scalable, producing methylation profiles comparable to traditional methods.

3 citations

DNA methylationexperimental assay

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Systems BiologybioRxivPreprintMay 10, 2023

High-resolution molecular atlas of a lung tumor in 3D

Tancredi Massimo Pentimalli, Simon Schallenberg, Daniel León-Periñán…·Nikolaus Rajewsky

This paper presents a 3D spatial atlas of a human lung carcinoma, revealing tumor microenvironment niches and their associated immune interactions and survival outcomes.

13 citations

humanspatial transcriptomics

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