Author

Jodh Singh Pannu

The University of Texas at San AntonioORCID 0000-0001-8414-0104Unclaimed ORCID profile · follow to get notified of new preprints

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Organism:C. elegans· 1 Organism:Drosophila· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein design· 1 Assay:protein structure· 1 Research Focus:protein structure prediction· 1

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Jeffrey VedanayagamiD· 1 shared Kendall Green· 1 shared

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2026-2026 · peak 1/yr

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Jeffrey VedanayagamORCID

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Recent·Most cited

BioinformaticsbioRxivPreprintSep 16, 2026

Calibrated structural homology transfer yields putative molecular functions for domains of unknown function in four model proteomes

Jodh Singh Pannu, Kendall Green, Jeffrey Vedanayagam

The paper evaluates functional annotation reliability from remote homology searches using retrospective DUFs and finds Foldseek performs better than MMseq2 but not significantly better than ESM-2 embeddings.

DOI 10.64898/2026.09.11.750891

yeastC. elegans

𝕏 PostBluesky