Author

Juha M. Partanen

University of HelsinkiORCID 0000-0001-8850-4825Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 2 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:mouse· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Kaia AchimiD· 2 shared Sami K. KilpineniD· 2 shared Aki Makkonen· 1 shared Alexandra B. ShintyapinaiD· 1 shared Amos Bonsdorff· 1 shared Anna KirjavaineniD· 1 shared Asla PitkäneniD· 1 shared Dag StenbergiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

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10 top collaborators · 18 mutual co-author links

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2 shared papersDevelopmental Biology

Kaia AchimORCID

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3 papers

Recent·Most cited

Developmental BiologybioRxivJan 26, 2025

Gene regulatory mechanisms guiding bifurcation of inhibitory and excitatory neuron lineages in the anterior brainstem

Sami K. Kilpinen, Lassi Virtanen, Silvana Bodington-Celma…·Juha M. Partanen

The paper investigates gene regulatory mechanisms controlling the differentiation of inhibitory GABAergic and excitatory glutamatergic neurons in the anterior brainstem using chromatin accessibility and transcription factor analysis.

2 citations

mouseChIP-seq

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Developmental BiologyDevelopmentPeer-reviewedJul 11, 2022

Gata2, Nkx2-2 and Skor2 form a transcription factor network regulating development of amidbrain GABAergic neuron subtype with characteristics of REM sleep regulatory neurons

Anna Kirjavainen, Parul Singh, Laura Lahti…·Juha M. Partanen

The paper identifies a transcription factor network involving Gata2, Nkx2-2, and Skor2 that regulates the development of midbrain GABAergic neurons associated with REM sleep regulation.

13 citations

mouserat

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NeurosciencebioRxivPreprintAug 30, 2019

Kainate-type of glutamate receptors regulate wiring of intrinsic glutamatergic connectivity in the amygdala

Maria Ryazantseva, Jonas Englund, Alexandra B. Shintyapina…·Sari E. Lauri

The paper shows that kainate-type glutamate receptors regulate the development of intrinsic glutamatergic connections in the amygdala during early postnatal life.

DOI 10.1101/753103

mouseexperimental assay

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