Sergey L. Gratiy

The paper introduces BMTK, an open-source software suite for multiscale brain circuit modeling, enabling simulations across different resolution levels with reduced coding requirements.

The paper identifies transcriptomic diversity in human supragranular neurons and links it to functional specialization and disease vulnerability.

The paper develops a multi-scale model of mouse primary visual cortex integrating structural and functional data to identify cell-class specific connectivity rules.

The paper introduces the SONATA data format to efficiently describe large-scale network models in neuroscience, enabling model construction, simulation, and sharing.

The paper develops a biophysically detailed in silico model of layer 4 of the mouse primary visual cortex, showing how functional synaptic connectivity reproduces experimental observations of neuronal responses to visual stimuli.

Covariance-based features plus unsupervised density-peak clustering sort spikes from up to 1000 channels in real time on one workstation, while tolerating noise and probe drift.