Author

Naoko Ohtani

Osaka Metropolitan UniversityORCID 0000-0001-8934-0797Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Ecology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Hideki FujiiiD· 2 shared Norifumi KawadaiD· 2 shared Daisuke MotookaiD· 1 shared Daisuke OikawaiD· 1 shared David A. BrenneriD· 1 shared Eiji HaraiD· 1 shared Fuminori TokunagaiD· 1 shared Hideto YuasaiD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersEcology

Hideki FujiiORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Major microbiota transitions across liver disease progression are mediated by key taxa linking host environments and microbial communities

Kenta Suzuki, Tomonori Kamiya, Hideki Fujii, Sotaro Takano, Yoshimi Yukawa‐Muto, Norifumi Kawada, Shinji Fukuda, Hiroshi Masuya, Naoko Ohtani

The paper uses an energy landscape analysis framework to identify key microbial taxa linked to liver disease progression and host environments.

Scientific Reports · Sep 25, 2026Peer-reviewedEcology

Shaving black fur uncovers hidden issues in p16-3MR mice

Nozomi Hori, Shimpei Kawamoto, Ken Uemura, Yumi Kinugasa‐Katayama, Yumiko Okumura, Kentaro Tanaka, Jeong Hoon Park, Masahiro Wakita, Daisuke Motooka, Naoko Ohtani, Eiji Hara

The paper identifies issues with the p16-3MR mouse model for in vivo bioluminescence imaging, showing that fur shaving is necessary for accurate signal detection and that previous results may be unreliable.

EMBO Reports · May 28, 2026Peer-reviewedMolecular Biology

A single-cell fixed RNA profiling of liver fibrosis progression and regression reveals SEMA4D and LMCD1 as key mediators of fibrogenesis

Pham Minh Duc, Lê Thị Thanh Thủy, Hoang Hai, Tran Van Bao, Nguyen Thi Ha, Pham Tuan Anh, Hiroko Ikenaga, Hideki Fujii, Kanako Yoshida, Masaru Enomoto, Sawako Uchida‐Kobayashi, Hideto Yuasa, Tsutomu Matsubara, Vu Thuong Huyen, Yi Cheng, , Norifumi Kawada

JHEP Reports · Feb 11, 2026Peer-reviewedCell Biology