Author

Nicholas R. Dunham

James Madison UniversityORCID 0000-0001-8995-3892Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cancer & tumor microenvironment· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1 Approach:mixed model· 1

Frequent Co-Authors

Alexander L. SchmidtiD· 1 shared Ari M Melnick· 1 shared B. Bishal PaudeliD· 1 shared Caroline K. SheridaniD· 1 shared Cem MeydaniD· 1 shared Chongzhi ZangiD· 1 shared Christopher BerndseniD· 1 shared Christopher E. MasoniD· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperMolecular Biology

Alexander L. SchmidtORCID

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2 papers

Recent·Most cited

Cancer BiologyNeoplasiaPeer-reviewedMar 16, 2026

CCAAT-enhancer binding protein delta functions as a tumor suppressor gene in acute myeloid leukemia

Subhash C. Prajapati, Cem Meydan, Yaseswini Neelamraju…·Francine E. Garrett-Bakelman

This study identifies CEBPD as a tumor suppressor gene in acute myeloid leukemia through functional experiments and genomic analyses.

1 citation

humanbulk RNA-seq

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Molecular BiologybioRxivPreprintAug 22, 2017

Modeling of Epigenetic Modification-Induced Changes in CRX-dependent Genes cis-Regulatory Elements

Reafa A. Hossain, Nicholas R. Dunham, Megan E. Harris…·Christopher Berndsen

The paper models how DNA methylation affects CRX binding to regulatory elements of RHO and PDE6B genes in human ocular tissues, showing inverse correlations and structural changes in DNA grooves.

DOI 10.1101/179523

humanDNA methylation

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