Author

Pedro Farinha

BC Cancer AgencyORCID 0000-0001-9364-9391Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 2 Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 4 Approach:statistical model· 4 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Research Focus:gene regulatory network inference· 2 Assay:scRNA-seq· 2 Assay:spatial transcriptomics· 2 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Christian SteidliD· 4 shared Aixiang JiangiD· 3 shared Andrew J. L. RothiD· 3 shared Andrew P. WengiD· 3 shared Clémentine SarkozyiD· 3 shared David W. ScottiD· 3 shared Laura K. HiltoniD· 3 shared Merrill BoyleiD· 3 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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4 shared papersCancer Biology

Christian SteidlORCID

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4 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 20, 2026

Developmental origins of thymic B-cell lymphomas

Shinya Rai, Yifan Yin, Manabu Fujisawa…·Christian Steidl

This study identifies a thymus-specific B-cell differentiation program linked to thymic B-cell lymphomagenesis through single-cell multiomics and spatial profiling.

DOI 10.64898/2026.10.17.759359

humanscRNA-seq

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Cancer BiologybioRxivPreprintMar 18, 2025

Multidimensional characterization of cellular ecosystems in Hodgkin lymphoma

Tomohiro Aoki, Gerben Duns, Shinya Rai…·Christian Steidl

This study identifies four molecular subtypes of Hodgkin lymphoma using multimodal data, revealing distinct clinical features and immune ecosystem dynamics.

1 citation

humanspatial transcriptomics

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BioinformaticsbioRxivPreprintNov 17, 2022

Integrated single cell analysis reveals co-evolution of malignant B cells and the tumor microenvironment in transformed follicular lymphoma

Clémentine Sarkozy, Shaocheng Wu, Katsuyoshi Takata…·Andrew J. L. Roth

The paper uses single-cell sequencing to study the evolution of follicular lymphoma and its microenvironment during transformation, finding gene programs and TME changes associated with progression.

DOI 10.1101/2022.11.17.516951

humanscRNA-seq

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GenomicsNature CommunicationsPeer-reviewedSep 25, 2018

Genome-wide discovery of somatic coding and regulatory variants in Diffuse Large B-cell Lymphoma

Sarah E. Arthur, Aixiang Jiang, Bruno M. Grande…·Ryan D. Morin

This study identifies somatic coding and regulatory variants in DLBCL, revealing novel mechanisms of oncogene deregulation and potential therapeutic targets.

146 citationstop 1%

humanwhole-exome sequencing

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