Author

Shinya Rai

BC Cancer AgencyORCID 0000-0003-3929-9751Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Assay:spatial transcriptomics· 3 Approach:statistical model· 3 Research Focus:clustering· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1

Frequent Co-Authors

Adèle TeleniusiD· 3 shared Andrew J. L. RothiD· 3 shared Andrew Lytle· 3 shared Christian SteidliD· 3 shared Eric LeeiD· 3 shared Shaocheng WuiD· 3 shared Tomohiro AokiiD· 3 shared Yifan YiniD· 3 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersCancer Biology

Adèle TeleniusORCID

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3 papers

Recent·Most cited

Cancer BiologybioRxivPreprintOct 20, 2026

Developmental origins of thymic B-cell lymphomas

Shinya Rai, Yifan Yin, Manabu Fujisawa…·Christian Steidl

This study identifies a thymus-specific B-cell differentiation program linked to thymic B-cell lymphomagenesis through single-cell multiomics and spatial profiling.

DOI 10.64898/2026.10.17.759359

humanscRNA-seq

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BioinformaticsbioRxivPreprintAug 18, 2026

Single-cell spatial multi-omic characterization of the tumour microenvironment in transformed follicular lymphoma

Shaocheng Wu, Eric Lee, Anne-Sophie Fratzscher…·Andrew J. L. Roth

The paper uses multi-omic single-cell spatial techniques to study FL transformation, finding spatial shifts in B-cell neighborhoods and immunomodulatory interactions linked to disease progression.

DOI 10.64898/2026.08.11.743383

humanspatial transcriptomics

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Cancer BiologybioRxivPreprintMar 18, 2025

Multidimensional characterization of cellular ecosystems in Hodgkin lymphoma

Tomohiro Aoki, Gerben Duns, Shinya Rai…·Christian Steidl

This study identifies four molecular subtypes of Hodgkin lymphoma using multimodal data, revealing distinct clinical features and immune ecosystem dynamics.

1 citation

humanspatial transcriptomics

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