Author

Shu‐Yi Liao

National Jewish HealthORCID 0000-0001-9477-3837Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Assay:bulk RNA-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Clara I. Restrepo· 2 shared Ivana V. YangiD· 2 shared Kristyn MacPhail· 2 shared Li LiiD· 2 shared Lisa A. MaieriD· 2 shared Margaret M. MroziD· 2 shared Antje PrasseiD· 1 shared Arunangshu Sarkar· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Clara I. Restrepo

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Molecular BiologyAmerican Journal of Respiratory and Critical Care MedicinePeer-reviewedJan 5, 2026

Spatial transcriptomics uncovers hybrid, pro-inflammatory and pro-fibrotic cellular niches in pulmonary granuloma of patients with chronic sarcoidosis

Leonard Christian, Hande Yilmaz, Jannik Ruwisch…·Jonas C. Schupp

This study uses spatial transcriptomics to identify hybrid pro-inflammatory and pro-fibrotic cellular niches in sarcoidosis granulomas, linking them to fibrosis and immune responses.

6 citationstop 1%

humanspatial transcriptomics

GenomicsbioRxivPreprintJan 20, 2025

Single Cell Transcriptome Signatures of Sarcoidosis in Lung Immune Cell Populations

Camille M. Moore, Shu‐Yi Liao, Cheyret Wood…·Ivana V. Yang

The paper identifies cell-specific molecular changes in sarcoidosis by analyzing single-cell RNA-seq data from lung immune cells, revealing distinct macrophage subpopulations and altered gene expression patterns associated with disease progression.

2 citations

humanscRNA-seq

GenomicsRespiratory ResearchPeer-reviewedJul 30, 2024

Multi-Omic Signatures of Sarcoidosis and Progression in Bronchoalveolar Lavage Cells

Iain R. Konigsberg, Nancy W. Lin, Shu‐Yi Liao…·Ivana V. Yang

The paper integrates DNA methylation, mRNA, and miRNA data from bronchoalveolar lavage cells to identify molecular signatures of sarcoidosis and disease progression.

15 citations

humanDNA methylation