Author

Timothy T. Harkins

Nvidia (United States)ORCID 0000-0001-9602-4653Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Organism:C. elegans· 1 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Alberto RivaiD· 1 shared Biao LiuiD· 1 shared Chandler Prince· 1 shared Craig S. PohliD· 1 shared Eleanor I. SamsiD· 1 shared Elyn Fritz‐WatersiD· 1 shared Evin M. PadhiiD· 1 shared George Vacek· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alberto RivaORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintMay 27, 2021

de novo variant calling identifies cancer mutation profiles in the 1000 Genomes Project

Jeffrey K. Ng, Pankaj Vats, Elyn Fritz‐Waters…·Tychele N. Turner

The paper identifies de novo variants in the 1000 Genomes Project using a GPU-based workflow, revealing cell line artifacts and cancer-related mutation profiles.

8 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintJan 3, 2020

✦ In-depth digest

Sequence and annotation of 42 cannabis genomes reveals extensive copy number variation in cannabinoid synthesis and pathogen resistance genes

Kevin Judd McKernan, Yvonne Helbert, Liam T. Kane…·Timothy T. Harkins

Long-read assemblies of an inbred cannabis trio plus whole-genome sequencing of 40 cultivars link cannabinoid synthase gene deletions to chemotype and associate CsTLP1 loss with powdery mildew susceptibility.

71 citations

plant (other)C. elegans

𝕏 PostBluesky