Author
European Bioinformatics InstituteORCID 0000-0001-9738-9726Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Yuyao Song, Guillermo E. Parada, Jimmy Tsz Hang Lee, Martin Hemberg
scASfind identifies cell type-specific alternative splicing patterns in scRNA-seq data, revealing splicing events missed by gene-level analysis.
Yuyao Song, Detlev Arendt, Irene Papatheodorou, Alvis Brāzma
This study challenges the ortholog conjecture by analyzing scRNA-seq data across species, revealing gene-specific patterns of expression conservation and divergence.
Yuyao Song, Yanhui Hu, Julian A. T. Dow…·Irene Papatheodorou
scGOclust compares cell types across species using gene ontology to identify functional conservation and divergence in scRNA-seq data.
Yuyao Song, Zhichao Miao, Alvis Brāzma, Irene Papatheodorou
This study benchmarks cross-species integration methods for single-cell RNA-seq data, finding that scANVI, scVI, and SeuratV4 balance species mixing and biology conservation.