Author

Emilia Pecora de Barros

University of California San DiegoORCID 0000-0001-9755-260XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:protein folding & dynamics· 2 Approach:statistical model· 2 Organism:human· 1 Assay:protein structure· 1 Assay:structural biology· 1

Frequent Co-Authors

Rommie E. AmaroiD· 2 shared Alfred M. FreebergiD· 1 shared Carrie L. PartchiD· 1 shared Clarisse Gravina RicciiD· 1 shared David M. VirshupiD· 1 shared James Andrew McCammoniD· 1 shared Jonathan M. PhilpottiD· 1 shared Megan R Torgrimson· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBiophysics

Rommie E. AmaroORCID

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2 papers

Recent·Most cited

BiophysicsJournal of Chemical Information and ModelingPeer-reviewedJan 6, 2026

Towards In Situ Dynamics of DNA-bound Full-Length p53 Tetramer

Özlem Demir, Emilia Pecora de Barros, Rommie E. Amaro

This study generates the first wild-type full-length p53 tetramer model bound to DNA and analyzes its conformational dynamics and mutations in cancer mutants.

DOI 10.1021/acs.jcim.5c02509

humanprotein structure

𝕏 PostBluesky

BiophysicsBiophysical JournalPeer-reviewedSep 18, 2025

Markovian State Models uncover Casein Kinase 1 dynamics that govern circadian period

Clarisse Gravina Ricci, Jonathan M. Philpott, Megan R Torgrimson…·Carrie L. Partch

This paper uses molecular dynamics simulations and Markovian State Models to analyze CK1 conformational dynamics, revealing how the tau mutant alters substrate selectivity and affects circadian period.

3 citations

structural biologydeep learning

𝕏 PostBluesky