Author

Kenneth Huang

University of California, San FranciscoORCID 0000-0001-9953-0711Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Biophysics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:drug response / drug discovery· 2 Organism:human· 2 Approach:simulation· 2 Assay:bulk RNA-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:mechanistic / dynamical model· 1 Research Focus:protein folding & dynamics· 1

Frequent Co-Authors

Andrej ŠaliiD· 2 shared Ignacia EcheverriaiD· 2 shared Allan HaldaneiD· 1 shared Avik BiswasiD· 1 shared Brent WakefieldiD· 1 shared Brooke L. O’DonnelliD· 1 shared Christopher ZhangiD· 1 shared Danielle E. JohnstoniD· 1 shared

Activity by Year

2025-2025 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBioinformatics

Andrej ŠaliORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 10, 2025

In silico analysis of the Chikungunya virus and SARS-CoV-2 Macrodomain

Vikas Ramyagya Tiwari, Moira M. Rachman, Kenneth Huang…·Andrej Šali

The paper analyzes the structural and dynamic differences between ChikV Mac1 and SARS-CoV-2 Mac1 to explain differences in ligand binding affinity and designs inhibitors for ChikV Mac1.

DOI 10.1101/2025.10.10.681726

virusprotein structure

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BiophysicsbioRxivPreprintApr 30, 2025

Evolutionary Sequence and Structural Basis for the Epistatic Origins of Drug Resistance in HIV

Avik Biswas, Indrani Choudhuri, Kenneth Huang…·Dmitry Lyumkis

This study identifies the structural and sequence basis of epistatic interactions driving drug resistance in HIV by combining sequence models and molecular dynamics simulations.

2 citations

humanproteomics

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Cell BiologyFEBS JournalPeer-reviewedJan 9, 2025

Pannexin 1 crosstalk with the Hippo pathway in malignant melanoma

Samar Sayedyahossein, Kenneth Huang, Christopher Zhang…·Silvia Peñuela

This study investigates the interaction between PANX1 and the Hippo pathway in melanoma, showing PANX1 modulates YAP levels and identifies potential therapeutic targets.

1 citation

humanbulk RNA-seq

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