Author

Takashi Shimbo

National Institute of Environmental Health SciencesORCID 0000-0002-0056-8814Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Aerica Nagornyuk· 1 shared Deepak Balakrishnan PoduvaliD· 1 shared Hiromi Sakashita· 1 shared Katsuto TamaiiD· 1 shared Kazuya Miyashita· 1 shared Kentaro Ikegami· 1 shared Kiwako Tomita· 1 shared Lorin E. OlsoniD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Aerica Nagornyuk

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2 papers

Recent·Most cited

GenomicsNucleic Acids ResearchPeer-reviewedJan 28, 2024

Genomic transcription factor binding site selection is edited by the chromatin remodeling factor CHD4

Mika Saotome, Deepak Balakrishnan Poduval, Sara A. Grimm…·Motoki Takaku

This study shows CHD4 prevents inappropriate gene activation by editing transcription factor binding site selection through chromatin remodeling in breast cancer cells and during reprogramming.

15 citations

humanChIP-seq

𝕏 PostBluesky

Developmental BiologyDevelopmentPeer-reviewedOct 1, 2022

Plap-1/Aspn lineage tracing and single-cell transcriptomics reveals cellular dynamics in the periodontal ligament

Tomoaki Iwayama, Mizuho Iwashita, Kazuya Miyashita…·Shinya Murakami

This study uses lineage tracing and single-cell transcriptomics to define cell populations and lineage relationships in the periodontal ligament.

31 citationstop 2%

mousescRNA-seq

𝕏 PostBluesky