Author

Yang Ying

University of California, San FranciscoORCID 0000-0002-0112-3016Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Developmental Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Alexis Leigh KrupiD· 1 shared Brian K. ShoichetiD· 1 shared Chang XieiD· 1 shared Jeremy F. ReiteriD· 1 shared John J. IrwiniD· 1 shared Keith E. MostoviD· 1 shared Matthew S. SmithiD· 1 shared Pekka PäivineniD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperDevelopmental Biology

Alexis Leigh KrupORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsJournal of Chemical Information and ModelingPeer-reviewedSep 1, 2021

Ligand Strain Energy in Large Library Docking

Shuo Gu, Matthew S. Smith, Yang Ying…·Brian K. Shoichet

This paper introduces a method to calculate ligand strain energy using torsional populations from the Cambridge Structural Database, improving docking hit rates by filtering strained decoys.

60 citationstop 4%

statistical modeldrug response / drug discovery

𝕏 PostBluesky

Developmental BiologybioRxivPreprintAug 31, 2020

Ciliary signaling-patterned smooth muscle drives tubular elongation

Yang Ying, Pekka Päivinen, Chang Xie…·Jeremy F. Reiter

This study shows that ciliary signaling patterns smooth muscle, which generates mechanical forces that activate YAP to drive longitudinal growth in the developing esophagus and small intestine.

2 citations

mousebulk RNA-seq

𝕏 PostBluesky