Nitesh Turaga

scDiagnostics assesses cell type annotations in single-cell transcriptomics data to detect misleading or conflicting labels that affect downstream analysis.

The paper describes AnVIL, a cloud-based platform that enables genomic data analysis without data transfer, improving security, scalability, and collaboration.

The paper benchmarks gene set enrichment methods using a curated compendium of disease datasets, identifying performance differences and providing recommendations for improved analysis.

Bioconda provides a sustainable, comprehensive distribution of bioinformatics software using Conda for reproducible analysis across platforms.